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  5. Als_g43890

Als_g43890 (AGD11)


Aliases : AGD11

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g43890
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Aop_g11606 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06373.t1 UNE14, Aspi01Gene06373 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G059500.1 Ceric.11G059500 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g20468 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g39380.1 AGD11, LOC_Os02g39380 Probable calcium-binding protein CML17 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Mp5g22000.1 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sam_g17420 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 93 158
IPR002048 EF_hand_dom 32 81
No external refs found!