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  5. Als_g44119

Als_g44119


Description : not classified & original description: none


Gene families : OG0000271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g44119
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00209740 SRC2, (AT)SRC2,... Protein SRC2 OS=Glycine max 0.03 OrthoFinder output from all 47 species
AT1G09070 SRC2, (AT)SRC2 soybean gene regulated by cold-2 0.03 OrthoFinder output from all 47 species
Adi_g014049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g047558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g075878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g45258 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.04 OrthoFinder output from all 47 species
Aop_g21259 SRC2, (AT)SRC2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34089.t1 Aspi01Gene34089 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53590.t1 SRC2, (AT)SRC2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G051400.1 SRC2, (AT)SRC2,... not classified & original description: pacid=50596485... 0.06 OrthoFinder output from all 47 species
Ceric.11G051600.1 SRC2, (AT)SRC2,... not classified & original description: pacid=50595393... 0.02 OrthoFinder output from all 47 species
Dac_g01443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32667 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Ehy_g07352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027920001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_28892 SRC2, (AT)SRC2 BON-interacting Prgrammed Cell Death co-suppressor (BAP) 0.02 OrthoFinder output from all 47 species
Lfl_g22033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g08510.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp6g00390.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04810 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Msp_g06506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37482 SRC2, (AT)SRC2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017164 SRC2, (AT)SRC2 not classified & original description: CDS=1-729 0.02 OrthoFinder output from all 47 species
Solyc01g067000.4.1 Solyc01g067000 Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 132.0) 0.02 OrthoFinder output from all 47 species
Solyc07g008070.1.1 Solyc07g008070 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g11023 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Spa_g13406 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Spa_g22860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008776_P001 Zm00001e008776 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e018728_P001 Zm00001e018728 Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 101.0) 0.02 OrthoFinder output from all 47 species
Zm00001e019101_P001 Zm00001e019101 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e028370_P001 Zm00001e028370 Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 105.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 8 108
No external refs found!