1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g44313

Als_g44313 (SRO1)


Aliases : SRO1

Description : organellar-signalling mediator *(RCD1) & original description: none


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g44313
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Adi_g003306 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Adi_g113375 SRO2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39428 No alias organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Aob_g26676 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Aop_g13526 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.15G016700.1 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G050900.1 SRO1, Ceric.35G050900 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03940 SRO2 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Len_g20718 SRO3 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
MA_10426389g0020 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.02 OrthoFinder output from all 47 species
MA_5033617g0010 SRO1 Probable inactive poly [ADP-ribose] polymerase SRO1... 0.02 OrthoFinder output from all 47 species
Msp_g03984 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g10863 SRO1 organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Solyc05g005290.4.1 SRO2, Solyc05g005290 Probable inactive poly [ADP-ribose] polymerase SRO2... 0.02 OrthoFinder output from all 47 species
Zm00001e002482_P002 SRO1, Zm00001e002482 Inactive poly [ADP-ribose] polymerase RCD1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR012317 Poly(ADP-ribose)pol_cat_dom 314 406
IPR022003 RST 503 567
IPR004170 WWE-dom 62 116
No external refs found!