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  5. Als_g45407

Als_g45407 (ATVTI13, VTI13)


Aliases : ATVTI13, VTI13

Description : Qb-type VTI-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g45407
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Ore_g00227 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pp3c11_5240V3.1 ATVTI13, VTI13,... Vesicle transport v-SNARE family protein 0.02 OrthoFinder output from all 47 species
Smo146421 SGR4, ZIG1,... Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051118 glucan endo-1,3-alpha-glucosidase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 90
No external refs found!