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  5. Als_g45722

Als_g45722


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g45722

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00236720 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00168800 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
AT1G12440 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g011055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g084995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g112620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g44539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49618 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g07634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035696 No alias not classified & original description: CDS=1-846 0.01 OrthoFinder output from all 47 species
Cba_g20151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G026700.1 Ceric.02G026700 not classified & original description: pacid=50584216... 0.03 OrthoFinder output from all 47 species
Ceric.1Z032000.1 Ceric.1Z032000 not classified & original description: pacid=50577072... 0.03 OrthoFinder output from all 47 species
Dcu_g49728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019930001 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Gb_14283 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os08g39450.1 LOC_Os08g39450 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Len_g21159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g49412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_211897g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g36990 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g04276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008612 No alias not classified & original description: CDS=1-753 0.02 OrthoFinder output from all 47 species
Solyc01g086960.3.1 Solyc01g086960 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Solyc12g100060.1.1 Solyc12g100060 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Spa_g02339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12005 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025028_P001 Zm00001e025028 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e034520_P001 Zm00001e034520 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 112 149
IPR002653 Znf_A20 13 36
No external refs found!