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  5. Als_g47332

Als_g47332 (EXPB3, ATEXPB3,...)


Aliases : EXPB3, ATEXPB3, ATHEXP BETA 1.6

Description : not classified & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g47332

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00146900 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.02 OrthoFinder output from all 47 species
AT3G45960 ATEXLA3, EXPL3,... expansin-like A3 0.04 OrthoFinder output from all 47 species
Adi_g010993 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103551 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17560 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18902 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23921 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11063 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g37460 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03743.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03745.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03746.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03747.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04997.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08256.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52233.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52603.t1 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G042600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15611 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23607 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25635 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26026 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34602 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028215001 ATHEXP ALPHA... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
LOC_Os02g16800.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g25990.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Len_g36480 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46726 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
MA_201510g0010 ATEXPL2, EXPL2,... alpha-like-class expansin. beta-like-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g26350.1 ATEXP14, EXPA14,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g09650.1 EXPA6, ATEXP6,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp3g09750.1 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Msp_g30638 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36666 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32683 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c24_9260V3.1 Pp3c24_9260 expansin A1 0.01 OrthoFinder output from all 47 species
Solyc03g115270.3.1 ATHEXP ALPHA ... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Spa_g11698 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54039 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000038_P001 ATHEXP BETA 1.4,... Expansin-B7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e004720_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e036860_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036907_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex IEP HCCA
BP GO:0006103 2-oxoglutarate metabolic process IEP HCCA
CC GO:0009353 mitochondrial oxoglutarate dehydrogenase complex IEP HCCA
CC GO:0030062 mitochondrial tricarboxylic acid cycle enzyme complex IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
CC GO:0045239 tricarboxylic acid cycle enzyme complex IEP HCCA
CC GO:0045240 dihydrolipoyl dehydrogenase complex IEP HCCA
CC GO:0045252 oxoglutarate dehydrogenase complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 171 250
IPR009009 RlpA-like_DPBB 79 158
No external refs found!