Als_g47411


Description : not classified & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g47411
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00214220 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
AT1G63860 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G66090 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G72840 No alias Disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from all 47 species
AT4G11170 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Aev_g14789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g39483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11382 RPP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48832.t1 Aspi01Gene48832 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60152.t1 Aspi01Gene60152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036294001 No alias External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
Gb_04246 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_26676 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_131802g0020 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_157917g0010 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
MA_188277g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_612059g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Pir_g46311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!