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  5. Pnu_g15283

Pnu_g15283


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g15283
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.03 OrthoFinder output from all 47 species
Aev_g43410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34782.t1 Aspi01Gene34782 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0020.g015535 OTP86 not classified & original description: CDS=1-2652 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g02897 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05404 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12907 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02677 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g30507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 162 193
IPR046848 E_motif 212 259
IPR002885 Pentatricopeptide_repeat 94 142
IPR002885 Pentatricopeptide_repeat 69 91
IPR002885 Pentatricopeptide_repeat 1 26
No external refs found!