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  5. Pnu_g15307

Pnu_g15307


Description : not classified & original description: none


Gene families : OG0000419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g15307

Target Alias Description ECC score Gene Family Method Actions
Ala_g03901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G126200.1 Ceric.01G126200 not classified & original description: pacid=50592933... 0.03 OrthoFinder output from all 47 species
Ceric.1Z009200.1 Ceric.1Z009200 not classified & original description: pacid=50632784... 0.02 OrthoFinder output from all 47 species
Ceric.1Z009300.1 Ceric.1Z009300 not classified & original description: pacid=50632775... 0.03 OrthoFinder output from all 47 species
Ceric.1Z009500.1 Ceric.1Z009500 not classified & original description: pacid=50632785... 0.05 OrthoFinder output from all 47 species
Ceric.1Z016800.1 Ceric.1Z016800 not classified & original description: pacid=50573548... 0.06 OrthoFinder output from all 47 species
Ceric.1Z204300.1 Ceric.1Z204300 not classified & original description: pacid=50607783... 0.04 OrthoFinder output from all 47 species
Ceric.1Z238400.1 Ceric.1Z238400 not classified & original description: pacid=50596978... 0.05 OrthoFinder output from all 47 species
Ceric.20G024200.1 Ceric.20G024200 not classified & original description: pacid=50567618... 0.03 OrthoFinder output from all 47 species
Dac_g13295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_11719 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g44707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g37437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002044 CBM_fam20 104 188
No external refs found!