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  5. Als_g50102

Als_g50102 (BTI1, RTNLB1)


Aliases : BTI1, RTNLB1

Description : ER-tubule curvature-inducing protein *(Reticulon) & original description: none


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g50102
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00221140 evm_27.TU.AmTr_v1... Reticulon-like protein B9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G41600 RTNLB4, BTI3 VIRB2-interacting protein 3 0.02 OrthoFinder output from all 47 species
Aev_g25949 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.07 OrthoFinder output from all 47 species
Ala_g24666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24680 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.15 OrthoFinder output from all 47 species
Als_g42179 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63604.t1 BTI1, RTNLB1,... ER-tubule curvature-inducing protein *(Reticulon) &... 0.08 OrthoFinder output from all 47 species
Ceric.19G012300.1 Ceric.19G012300 ER-tubule curvature-inducing protein *(Reticulon) &... 0.08 OrthoFinder output from all 47 species
Dcu_g36852 BTI1, RTNLB1 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Gb_33890 No alias ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
LOC_Os04g57420.1 LOC_Os04g57420 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
LOC_Os05g24770.1 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Len_g56590 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.15 OrthoFinder output from all 47 species
MA_10432752g0010 No alias ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Msp_g38145 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Pnu_g12300 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Sam_g11395 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.1 OrthoFinder output from all 47 species
Sam_g37684 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.18 OrthoFinder output from all 47 species
Solyc06g036430.3.1 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Spa_g02967 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Spa_g20416 RTNLB3 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Spa_g37965 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Spa_g56482 RTNLB3 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Tin_g08081 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Zm00001e005880_P001 Zm00001e005880 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Zm00001e016413_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 114 268
No external refs found!