Pnu_g15322 (LACS4)


Aliases : LACS4

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g15322
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT1G49430 LRD2, LACS2 long-chain acyl-CoA synthetase 2 0.03 OrthoFinder output from all 47 species
AT2G47240 CER8, LACS1 AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Adi_g036095 ATLACS7, LACS7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03531 LACS6, ATLACS6 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Cre12.g507400 LACS6, ATLACS6 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder output from all 47 species
Cre13.g566650 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_21648 LACS6, ATLACS6 peroxisomal long-chain acyl-CoA synthetase 0.02 OrthoFinder output from all 47 species
MA_10437042g0010 LACS6, ATLACS6 Long chain acyl-CoA synthetase 6, peroxisomal... 0.03 OrthoFinder output from all 47 species
MA_839621g0010 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pnu_g25755 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Pp3c6_11410V3.1 LACS4, Pp3c6_11410 AMP-dependent synthetase and ligase family protein 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 65 525
IPR025110 AMP-bd_C 535 576
No external refs found!