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  5. Als_g50401

Als_g50401


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g50401
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00074810 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G68300 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g012300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g042687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37519.t1 Aspi01Gene37519 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G021300.1 Ceric.24G021300 not classified & original description: pacid=50629890... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000836.17 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g08808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031226001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031228001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_24984 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os01g57450.1 LOC_Os01g57450 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g63010.1 LOC_Os01g63010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g53320.1 LOC_Os02g53320 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g54918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10437265g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_108930g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_698119g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g05760.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g44939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100370.3.1 Solyc01g100370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g006680.3.1 Solyc03g006680 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g014600.3.1 Solyc04g014600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g05685 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025878_P001 Zm00001e025878 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035202_P002 Zm00001e035202 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 10 164
No external refs found!