1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g50842

Als_g50842


Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0004431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004431_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g50842

Target Alias Description ECC score Gene Family Method Actions
Lfl_g29269 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
MA_95631g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g20121 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR041872 Anticodon_Met 275 429
IPR015413 Methionyl/Leucyl_tRNA_Synth 1 253
No external refs found!