1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g52226

Als_g52226


Description : component *(uL10c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0005040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005040_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g52226
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00218670 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
AT5G13510 No alias Ribosomal protein L10 family protein 0.1 OrthoFinder output from all 47 species
Adi_g084574 No alias component *(uL10) of organelle large ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aev_g00872 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ala_g04789 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Aob_g00810 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aop_g05054 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g27816 No alias component *(uL10) of organelle large ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.20G078900.1 Ceric.20G078900 component *(uL10c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020516.18 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Cre06.g272850 No alias Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
Dac_g03164 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Dcu_g03520 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Dde_g19314 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g00714 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Gb_21730 No alias component mtRPL10|psRPL10 of large ribosomal subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os03g17580.1 LOC_Os03g17580 component mtRPL10|psRPL10 of large ribosomal subunit... 0.08 OrthoFinder output from all 47 species
Len_g13372 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Lfl_g00434 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
MA_483364g0010 No alias component mtRPL10|psRPL10 of large ribosomal subunit... 0.04 OrthoFinder output from all 47 species
Mp4g07300.1 No alias component mtRPL10|psRPL10 of large ribosomal subunit... 0.1 OrthoFinder output from all 47 species
Nbi_g00675 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ore_g19831 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g30194 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g11548 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Pp3c1_1330V3.1 Pp3c1_1330 Ribosomal protein L10 family protein 0.06 OrthoFinder output from all 47 species
Ppi_g54796 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008577 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Smo233811 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Solyc04g009540.1.1 Solyc04g009540 component mtRPL10|psRPL10 of large ribosomal subunit... 0.06 OrthoFinder output from all 47 species
Spa_g24954 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Tin_g00512 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Zm00001e001284_P001 Zm00001e001284 component mtRPL10|psRPL10 of large ribosomal subunit... 0.1 OrthoFinder output from all 47 species
Zm00001e038440_P001 Zm00001e038440 component mtRPL10|psRPL10 of large ribosomal subunit... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 74 156
No external refs found!