Als_g52779


Description : not classified & original description: none


Gene families : OG0002164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g52779

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00238060 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Cba_g11807 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ceric.30G013200.1 Ceric.30G013200 not classified & original description: pacid=50609199... 0.06 OrthoFinder output from all 47 species
Ehy_g13935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003308001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01030507001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_25903 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g68900.1 LOC_Os01g68900 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g27230.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001656 No alias not classified & original description: CDS=1-1512 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002384 No alias not classified & original description: CDS=1-2250 0.03 OrthoFinder output from all 47 species
Solyc02g081180.2.1 Solyc02g081180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g059990.1.1 Solyc09g059990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!