1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g54544

Als_g54544


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g54544
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00074810 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G58450 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g054134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48339.t1 Aspi01Gene48339 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023785001 RD2 No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01027993001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01027994001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031228001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01035248001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_28753 RD2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_33366 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g19820.3 LOC_Os01g19820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g19270.1 LOC_Os03g19270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435390g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_139433g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_188861g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g02210.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g20177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016731 No alias not classified & original description: CDS=1-588 0.03 OrthoFinder output from all 47 species
Sam_g35526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo267677 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc05g054270.2.1 Solyc05g054270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g31160 No alias HUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025878_P001 Zm00001e025878 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 50 208
No external refs found!