Als_g55161


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g55161

Target Alias Description ECC score Gene Family Method Actions
AT2G21090 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g46724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26222 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05214 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.04 OrthoFinder output from all 47 species
Dde_g28398 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g68490.1 MEF21, LOC_Os01g68490 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os03g13230.1 LOC_Os03g13230 Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
LOC_Os04g35650.1 LOC_Os04g35650 Pentatricopeptide repeat-containing protein At3g26540... 0.04 OrthoFinder output from all 47 species
LOC_Os04g41120.1 LOC_Os04g41120 Pentatricopeptide repeat-containing protein At4g38010... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50460.1 LOC_Os05g50460 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os07g15570.1 CRR2, LOC_Os07g15570 Pentatricopeptide repeat-containing protein At2g46050,... 0.04 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28830.1 LOC_Os08g28830 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os09g15800.1 LOC_Os09g15800 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os11g45410.1 LOC_Os11g45410 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Len_g03388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18984 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_139163g0010 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Msp_g06933 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g01500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63803 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g084830.4.1 Solyc02g084830 Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
Tin_g06632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0031082 BLOC complex IEP HCCA
CC GO:0031083 BLOC-1 complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 142 188
IPR002885 Pentatricopeptide_repeat 39 86
IPR002885 Pentatricopeptide_repeat 14 36
IPR002885 Pentatricopeptide_repeat 116 136
No external refs found!