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  5. Als_g55287

Als_g55287


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g55287

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00127120 CRR22,... Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00184210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Adi_g003361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035608 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g039747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06589 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10029 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05713 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37586 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26859 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07080.t1 Aspi01Gene07080 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56635.t1 Aspi01Gene56635 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05866 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19308 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19771 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.02 OrthoFinder output from all 47 species
Dac_g43217 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08294 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38425 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02867 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08191 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12108 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17755 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18024 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15222 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32904 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_381817g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_95507g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g23175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26949 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27636 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27843 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12907 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12909 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40943 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43020 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15474 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32640 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32654 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33298 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46357 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56599 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g16937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35682 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 487 512
IPR002885 Pentatricopeptide_repeat 255 279
IPR002885 Pentatricopeptide_repeat 356 377
IPR002885 Pentatricopeptide_repeat 152 178
IPR002885 Pentatricopeptide_repeat 78 124
IPR002885 Pentatricopeptide_repeat 280 328
IPR002885 Pentatricopeptide_repeat 180 226
IPR002885 Pentatricopeptide_repeat 384 431
No external refs found!