Pnu_g15871 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g15871

Target Alias Description ECC score Gene Family Method Actions
AT3G49170 EMB2261 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62890 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g036623 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12064 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012358 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2001 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012689 No alias not classified & original description: CDS=1-2352 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025886 No alias not classified & original description: CDS=1-2634 0.03 OrthoFinder output from all 47 species
Azfi_s0115.g046284 No alias not classified & original description: CDS=76-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0195.g057240 No alias not classified & original description: CDS=1-2328 0.03 OrthoFinder output from all 47 species
Azfi_s0676.g081825 No alias not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Cba_g27691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G097800.1 Ceric.04G097800 not classified & original description: pacid=50631082... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.101 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os06g41040.1 LOC_Os06g41040 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
LOC_Os06g47920.1 LOC_Os06g47920 Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
Len_g04137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17565 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26486 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g26925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41118 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19959 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11224 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06477 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53548 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001330 No alias not classified & original description: CDS=1-3081 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007440 No alias not classified & original description: CDS=1-1395 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015411 No alias not classified & original description: CDS=1-3726 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017029 No alias not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022909 No alias not classified & original description: CDS=1-2484 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023182 No alias not classified & original description: CDS=1-4812 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0196.g025493 No alias not classified & original description: CDS=1-2751 0.02 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Smo171135 OTP84 Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Tin_g43886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR046849 Eplus_motif 2 29
IPR032867 DYW_dom 33 125
No external refs found!