Als_g55875 (PUB26)

Aliases : PUB26

Description : not classified & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g55875
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AT3G19380	PUB25	plant U-box 25	0.03	OrthoFinder output from all 47 species
Als_g11423	PUB15	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g18955	PUB26	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g14998	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os04g34030.1	PUB23, LOC_Os04g34030	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10432813g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
MA_8030489g0010	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
MA_8837995g0010	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Mp3g22740.1	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Msp_g47390	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g08919	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11257	PUB26	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Smo403954	PUB25	U-box domain-containing protein 25 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Zm00001e007109_P001	PUB23, Zm00001e007109	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e014752_P001	PUB23, Zm00001e014752	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e014779_P001	PUB26, Zm00001e014779	U-box domain-containing protein 26 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e019173_P001	PUB23, Zm00001e019173	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	2	50

External Links

No external refs found!

Als_g55875 (PUB26)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation