Description : component *(eL21) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001239_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Als_g56032 | |
| Cluster | HCCA: Cluster_172 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00252940 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G09590 | No alias | Translation protein SH3-like family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G09690 | No alias | Translation protein SH3-like family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G57660 | No alias | Translation protein SH3-like family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g043900 | No alias | component *(eL21) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g03881 | No alias | component *(eL21) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09546 | No alias | component *(eL21) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G094100.1 | Ceric.07G094100 | component *(eL21) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G032200.1 | Ceric.10G032200 | component *(eL21) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.24G006900.1 | Ceric.24G006900 | component *(eL21) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000640.5 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g278135 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01001130001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033455001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g11206 | No alias | component *(eL21) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g01390.1 | No alias | component RPL21 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c12_9320V3.1 | Pp3c12_9320 | Translation protein SH3-like family protein | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c13_2360V3.1 | Pp3c13_2360 | Translation protein SH3-like family protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c3_5550V3.1 | Pp3c3_5550 | Translation protein SH3-like family protein | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c4_21520V3.1 | Pp3c4_21520 | Translation protein SH3-like family protein | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g38886 | No alias | component *(eL21) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g078960.2.1 | Solyc10g078960 | component RPL21 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
