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  5. Als_g57360

Als_g57360


Description : component *(uL14) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g57360
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00206470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT1G04480 No alias Ribosomal protein L14p/L23e family protein 0.03 OrthoFinder output from all 47 species
AT3G04400 emb2171 Ribosomal protein L14p/L23e family protein 0.02 OrthoFinder output from all 47 species
Ala_g00489 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g07889 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.14G092400.1 Ceric.14G092400 component *(uL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021290.9 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Cre04.g211800 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g12677 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Dde_g03654 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01027905001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01028407001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os02g56960.1 LOC_Os02g56960 component RPL23 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os03g04590.1 LOC_Os03g04590 component RPL23 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os10g32920.1 LOC_Os10g32920 component RPL23 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp6g14310.1 No alias component RPL23 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Nbi_g37801 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ore_g27728 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c27_860V3.1 Pp3c27_860 Ribosomal protein L14p/L23e family protein 0.01 OrthoFinder output from all 47 species
Sam_g47118 No alias component *(uL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc06g008170.3.1 Solyc06g008170 component RPL23 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc06g083780.3.1 Solyc06g083780 component RPL23 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc09g072865.1.1 Solyc09g072865 component RPL23 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc09g090610.3.1 Solyc09g090610 component RPL23 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e000323_P001 Zm00001e000323 component RPL23 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e023614_P001 Zm00001e023614 component RPL23 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0070469 respirasome IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR000218 Ribosomal_L14P 42 160
No external refs found!