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  5. Als_g57552

Als_g57552 (HUA1)


Aliases : HUA1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g57552
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
Adi_g061091 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Adi_g075180 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Adi_g103383 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ala_g08740 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35283.t1 ZFN1, Aspi01Gene35283 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene65607.t1 ZFN1, Aspi01Gene65607 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0013.g013277 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030794 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g05215 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g26989 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03798 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dcu_g13010 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07764 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01019118001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01019119001 ZFN1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Lfl_g16319 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Msp_g06264 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pnu_g17909 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Smo45667 ZFN1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Spa_g37336 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Zm00001e008903_P005 ZFN1, Zm00001e008903 C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 54 78
IPR000571 Znf_CCCH 105 129
IPR000571 Znf_CCCH 310 334
IPR000571 Znf_CCCH 263 288
IPR000571 Znf_CCCH 12 37
No external refs found!