Pnu_g16126 (CRR2)


Aliases : CRR2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00153950 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00151990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s00068p00031610 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00166950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g14730... 0.03 OrthoFinder output from all 47 species
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00084p00089150 OTP86,... Pentatricopeptide repeat-containing protein At3g63370,... 0.04 OrthoFinder output from all 47 species
Adi_g096938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04818 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26948 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23085.t1 Aspi01Gene23085 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0256.g060514 No alias RecA-activity modulator *(RecX) & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0261.g060752 CRR22 not classified & original description: CDS=1-1500 0.04 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.03 OrthoFinder output from all 47 species
Cba_g04634 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20706 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g29948 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08508 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50838 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024606001 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33700.1 LOC_Os08g33700 Pentatricopeptide repeat-containing protein At3g47530... 0.03 OrthoFinder output from all 47 species
Len_g22113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54965 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35976 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04329 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04505 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30641 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55770 MEF22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009076 No alias not classified & original description: CDS=1-1737 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019295 No alias not classified & original description: CDS=1-1539 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026002 No alias not classified & original description: CDS=74-2389 0.03 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc09g009790.4.1 Solyc09g009790 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g26279 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26719 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38826 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 310 347
IPR002885 Pentatricopeptide_repeat 95 142
IPR002885 Pentatricopeptide_repeat 1 41
IPR046849 Eplus_motif 279 306
IPR002885 Pentatricopeptide_repeat 170 193
IPR002885 Pentatricopeptide_repeat 69 93
IPR046848 E_motif 212 274
No external refs found!