Pnu_g16140


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16140

Target Alias Description ECC score Gene Family Method Actions
Adi_g015952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41404 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0351.g066580 No alias not classified & original description: CDS=1-3804 0.03 OrthoFinder output from all 47 species
Cba_g14919 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003766001 LPA66 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01011501001 No alias Pentatricopeptide repeat-containing protein At5g39350... 0.02 OrthoFinder output from all 47 species
GSVIVT01027525001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Gb_34736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
LOC_Os03g63260.3 LOC_Os03g63260 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g04697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_114565g0020 OTP84 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_958908g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
Msp_g03174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04305 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04542 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30631 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002433 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g04342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37838 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc07g053520.2.1 SLO1, Solyc07g053520 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Tin_g26904 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034478_P001 Zm00001e034478 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Zm00001e039394_P003 Zm00001e039394 Pentatricopeptide repeat-containing protein At5g04780,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 316 368
IPR002885 Pentatricopeptide_repeat 271 294
IPR002885 Pentatricopeptide_repeat 95 142
IPR002885 Pentatricopeptide_repeat 195 243
IPR002885 Pentatricopeptide_repeat 1 40
No external refs found!