Pnu_g16158 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00256920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00176600 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g30904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g20395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16165 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015813 No alias not classified & original description: CDS=355-3027 0.04 OrthoFinder output from all 47 species
Azfi_s3759.g116773 CRR2 not classified & original description: CDS=1-1509 0.04 OrthoFinder output from all 47 species
Cba_g06861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19882 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33342 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036757001 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
LOC_Os01g11470.1 LOC_Os01g11470 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g04836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07335 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_681272g0010 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
MA_89214g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_953793g0020 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Msp_g41114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24441 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13499 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g21500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53705 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014492 No alias not classified & original description: CDS=1-2247 0.04 OrthoFinder output from all 47 species
Sam_g15402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo171135 OTP84 Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 299 324
IPR002885 Pentatricopeptide_repeat 198 222
IPR002885 Pentatricopeptide_repeat 400 425
IPR002885 Pentatricopeptide_repeat 426 473
IPR002885 Pentatricopeptide_repeat 122 169
IPR002885 Pentatricopeptide_repeat 224 271
IPR002885 Pentatricopeptide_repeat 325 372
IPR002885 Pentatricopeptide_repeat 21 69
No external refs found!