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  5. Als_g59589

Als_g59589


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g59589
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
Adi_g003868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005655 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g041176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23915 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08304 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04064 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G042200.1 Ceric.02G042200 not classified & original description: pacid=50585785... 0.04 OrthoFinder output from all 47 species
Ceric.04G103900.1 Ceric.04G103900 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.10G063700.1 Ceric.10G063700 not classified & original description: pacid=50612924... 0.04 OrthoFinder output from all 47 species
Ceric.13G010900.1 Ceric.13G010900 not classified & original description: pacid=50636623... 0.03 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.03 OrthoFinder output from all 47 species
Ceric.14G093100.1 EMB2758, Ceric.14G093100 not classified & original description: pacid=50634261... 0.04 OrthoFinder output from all 47 species
Ceric.18G013300.1 EMB2758, Ceric.18G013300 not classified & original description: pacid=50620993... 0.05 OrthoFinder output from all 47 species
Ceric.21G080700.1 Ceric.21G080700 not classified & original description: pacid=50603857... 0.03 OrthoFinder output from all 47 species
Ceric.27G064300.1 Ceric.27G064300 not classified & original description: pacid=50606133... 0.04 OrthoFinder output from all 47 species
Ceric.28G055900.1 Ceric.28G055900 not classified & original description: pacid=50569676... 0.05 OrthoFinder output from all 47 species
Ceric.28G068900.1 Ceric.28G068900 not classified & original description: pacid=50570286... 0.07 OrthoFinder output from all 47 species
Ceric.30G057500.1 Ceric.30G057500 not classified & original description: pacid=50608517... 0.04 OrthoFinder output from all 47 species
Ceric.35G063700.1 Ceric.35G063700 not classified & original description: pacid=50581590... 0.04 OrthoFinder output from all 47 species
Ceric.37G004200.1 Ceric.37G004200 not classified & original description: pacid=50616137... 0.04 OrthoFinder output from all 47 species
Ceric.37G010300.1 Ceric.37G010300 not classified & original description: pacid=50616652... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Dac_g09645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24377 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01008173001 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.04 OrthoFinder output from all 47 species
GSVIVT01015466001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
GSVIVT01017209001 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01017365001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01021246001 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
GSVIVT01023644001 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.05 OrthoFinder output from all 47 species
GSVIVT01028154001 No alias Pentatricopeptide repeat-containing protein At2g35030,... 0.04 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
GSVIVT01036142001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
GSVIVT01036943001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g53944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_794605g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Nbi_g03782 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04945 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g08599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15172 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16442 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27954 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28139 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39469 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g44509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04624 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55608 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62956 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003208 No alias monogalactosyldiacylglycerol lipase *(HIL1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026675 No alias not classified & original description: CDS=1-1575 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0252.g026781 No alias not classified & original description: CDS=1-2700 0.02 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g025700.2.1 Solyc03g025700 OTP70 plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Solyc07g062820.1.1 Solyc07g062820 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Spa_g14016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21292 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30230 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 281 303
IPR002885 Pentatricopeptide_repeat 307 353
IPR002885 Pentatricopeptide_repeat 203 252
No external refs found!