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  5. Pnu_g16296

Pnu_g16296


Description : not classified & original description: none


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16296
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00121850 RHS8,... Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan... 0.02 OrthoFinder output from all 47 species
AMTR_s00001p00122370 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00107450 MUR3, KAM1,... Cell... 0.02 OrthoFinder output from all 47 species
AT1G63450 RHS8 root hair specific 8 0.03 OrthoFinder output from all 47 species
AT2G31990 No alias Exostosin family protein 0.03 OrthoFinder output from all 47 species
Adi_g017997 GT18, ATGT18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079878 GT18, ATGT18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13604 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Als_g07662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04498 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00757.t1 RHS8, Aspi01Gene00757 galacturonosyltransferase *(XUT1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32184.t1 Aspi01Gene32184 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37728.t1 Aspi01Gene37728 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41418.t1 Aspi01Gene41418 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene67024.t1 Aspi01Gene67024 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010029 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g011985 No alias not classified & original description: CDS=1-1074 0.03 OrthoFinder output from all 47 species
Cba_g03928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14532 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25028 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g43194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z125100.1 Ceric.1Z125100 not classified & original description: pacid=50582244... 0.03 OrthoFinder output from all 47 species
Ceric.22G020100.1 MUR3, KAM1,... 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Ceric.25G014600.1 GT18, ATGT18,... galactosyltransferase *(XLT2) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.38G023800.1 MUR3, KAM1,... not classified & original description: pacid=50579628... 0.03 OrthoFinder output from all 47 species
Dcu_g25476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09973 MUR3, KAM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21317 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05961 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12520 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26388 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os03g05110.1 MUR3, KAM1,... UDP-galactose-dependent 1,2-beta-galactosyltransferase 0.02 OrthoFinder output from all 47 species
LOC_Os10g32170.1 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 OrthoFinder output from all 47 species
Len_g09002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428118g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.01 OrthoFinder output from all 47 species
MA_2898973g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.01 OrthoFinder output from all 47 species
MA_5948g0010 No alias Probable xyloglucan galactosyltransferase GT11... 0.02 OrthoFinder output from all 47 species
MA_6286334g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.01 OrthoFinder output from all 47 species
Msp_g41625 GT18, ATGT18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08902 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Ore_g26274 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19634 MUR3, KAM1 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16473 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018133 No alias not classified & original description: CDS=1-1707 0.02 OrthoFinder output from all 47 species
Sam_g05312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19751 No alias galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Smo126870 RHS8 Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan... 0.03 OrthoFinder output from all 47 species
Solyc02g014140.1.1 Solyc02g014140 Probable xyloglucan galactosyltransferase GT17... 0.02 OrthoFinder output from all 47 species
Solyc12g056260.1.1 RHS8, Solyc12g056260 xyloglucan galacturonosyltransferase 0.04 OrthoFinder output from all 47 species
Spa_g41520 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38834 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002306_P001 Zm00001e002306 Probable xyloglucan galactosyltransferase GT19... 0.02 OrthoFinder output from all 47 species
Zm00001e037897_P001 Zm00001e037897 Probable xyloglucan galactosyltransferase GT19... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 76 416
No external refs found!