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  5. Pnu_g16415

Pnu_g16415 (UBQ11)


Aliases : UBQ11

Description : not classified & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16415
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G11980 RUB3 ubiquitin-related protein 3 0.02 OrthoFinder output from all 47 species
Aop_g14593 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58963 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16401.t1 UBQ10, Aspi01Gene16401 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23078.t1 UBQ4, Aspi01Gene23078 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23079.t1 UBQ4, Aspi01Gene23079 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23081.t1 UBQ11, Aspi01Gene23081 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23133.t1 UBQ4, Aspi01Gene23133 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23135.t1 UBQ11, Aspi01Gene23135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34959 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g79067 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29490 RUB1, ATRUB1, NEDD8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g39590.1 LOC_Os10g39590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g44195 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g17104 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22645 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23365 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Mp4g02740.1 UBQ10 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Mp6g03960.1 UBQ4 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Mp6g16040.1 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
Msp_g17628 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32858 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pir_g64360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07156 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21361 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g25580 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 10 73
IPR000626 Ubiquitin-like_dom 79 149
No external refs found!