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  5. Als_g62669

Als_g62669


Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g62669
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AT1G20490 No alias AMP-dependent synthetase and ligase family protein 0.06 OrthoFinder output from all 47 species
Adi_g015908 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26222.t1 Aspi01Gene26222 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G029500.1 OPCL1, Ceric.18G029500 not classified & original description: pacid=50621164... 0.03 OrthoFinder output from all 47 species
Gb_24034 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g07586 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo268211 OPCL1 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g04052 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032697_P002 Zm00001e032697 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 40 442
IPR025110 AMP-bd_C 451 526
No external refs found!