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  5. Als_g63113

Als_g63113


Description : snoRNP rRNA methylation complex assembly factor *(NUFIP) & original description: none


Gene families : OG0003682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g63113

Target Alias Description ECC score Gene Family Method Actions
AT5G18440 No alias CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental... 0.03 OrthoFinder output from all 47 species
Adi_g082531 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.04 OrthoFinder output from all 47 species
Adi_g086858 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Aob_g11786 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Aop_g08132 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Cba_g38684 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.04 OrthoFinder output from all 47 species
GSVIVT01027215001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
LOC_Os01g59860.1 LOC_Os01g59860 NUFIP snoRNP rRNA methylation complex assembly factor 0.03 OrthoFinder output from all 47 species
Lfl_g27692 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
MA_10431482g0010 No alias NUFIP snoRNP rRNA methylation complex assembly factor 0.03 OrthoFinder output from all 47 species
MA_30455g0010 No alias NUFIP snoRNP rRNA methylation complex assembly factor 0.02 OrthoFinder output from all 47 species
Msp_g42252 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Sam_g16776 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Solyc01g096920.3.1 Solyc01g096920 NUFIP snoRNP rRNA methylation complex assembly factor 0.03 OrthoFinder output from all 47 species
Spa_g15180 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.04 OrthoFinder output from all 47 species
Tin_g18803 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.04 OrthoFinder output from all 47 species
Zm00001e019484_P003 Zm00001e019484 NUFIP snoRNP rRNA methylation complex assembly factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR019496 NUFIP1_cons_dom 489 524
No external refs found!