Pnu_g16723


Description : rhamnosyltransferase *(RRT) & original description: none


Gene families : OG0001379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16723

Target Alias Description ECC score Gene Family Method Actions
Aev_g06087 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18194 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05609 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15521 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24342 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g17390.1 LOC_Os06g17390 rhamnosyltransferase 0.02 OrthoFinder output from all 47 species
Pir_g11742 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16164 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03182 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012046 No alias rhamnosyltransferase *(RRT) & original description: CDS=1-1746 0.02 OrthoFinder output from all 47 species
Smo110454 No alias O-fucosyltransferase 21 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo148957 No alias O-fucosyltransferase 34 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g114730.3.1 Solyc03g114730 rhamnosyltransferase 0.03 OrthoFinder output from all 47 species
Zm00001e015704_P001 Zm00001e015704 rhamnosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 127 447
No external refs found!