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  5. Pnu_g16810

Pnu_g16810


Description : not classified & original description: none


Gene families : OG0001420 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001420_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16810
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT2G32500 No alias Stress responsive alpha-beta barrel domain protein 0.05 OrthoFinder output from all 47 species
Adi_g024213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g24106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22198.t1 Aspi01Gene22198 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g22863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G078000.1 Ceric.17G078000 not classified & original description: pacid=50617320... 0.06 OrthoFinder output from all 47 species
Ceric.30G053400.1 Ceric.30G053400 not classified & original description: pacid=50609253... 0.03 OrthoFinder output from all 47 species
Dac_g08454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23070 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g12201 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01019803001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_28450 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g02020.2 LOC_Os03g02020 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g08947 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g19557 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g12186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45959 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g09884 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25217 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g00745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e039083_P001 Zm00001e039083 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013097 Dabb 80 173
IPR013097 Dabb 197 289
No external refs found!