Pnu_g17490 (GATA12)

Aliases : GATA12

Description : transcription factor *(A/B-GATA) & original description: none

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g17490
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00080350	GATA9,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00155p00085360	GATA11,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT1G08000	GATA10	GATA transcription factor 10	0.03	OrthoFinder output from all 47 species
AT3G60530	GATA4	GATA transcription factor 4	0.03	OrthoFinder output from all 47 species
Adi_g016252	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g021303	GATA4	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g022369	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g036776	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g082687	GATA5	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g116352	GATA12	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g14957	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g32827	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38669	GATA2	transcription factor *(A/B-GATA) & original description: none	0.07	OrthoFinder output from all 47 species
Als_g48787	GATA12	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g02176	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g23859	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g09752	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g62121	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene07249.t1	GATA9, Aspi01Gene07249	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene50457.t1	GATA20, Aspi01Gene50457	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene51912.t1	GATA9, Aspi01Gene51912	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene61259.t1	GATA15, Aspi01Gene61259	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69106.t1	GATA4, Aspi01Gene69106	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.07G000700.1	GATA12, Ceric.07G000700	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.27G027400.1	GATA12, Ceric.27G027400	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g10781	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g23014	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11115	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g34018	GATA12	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g06602	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g26522	GATA4	transcription factor *(A/B-GATA) & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g26857	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01016265001	BME3-ZF, BME3, GATA8	GATA transcription factor 8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01018833001	GATA5	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01035048001	GATA15	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
Gb_24250	GATA9	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
LOC_Os02g56250.1	BME3-ZF, BME3,...	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os06g37450.1	GATA22, CGA1,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
LOC_Os10g32070.1	GATA1, LOC_Os10g32070	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
LOC_Os10g40810.1	GATA2, LOC_Os10g40810	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os12g07120.1	GATA14, LOC_Os12g07120	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os12g42970.1	GATA4, LOC_Os12g42970	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Len_g05301	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g03183	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10434815g0010	GATA4	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Mp1g03950.1	GATA9	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Msp_g10622	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g48249	GATA9	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g14050	GATA19	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26719	GATA9	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g40724	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42127	GATA10	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g06393	GATA6	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14533	GATA9	transcription factor *(A/B-GATA) & original description: none	0.07	OrthoFinder output from all 47 species
Pnu_g22180	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g110310.3.1	GATA5, Solyc01g110310	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Solyc03g033660.4.1	GATA5, Solyc03g033660	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Solyc04g015360.3.1	BME3-ZF, BME3,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Solyc05g056120.3.1	BME3-ZF, BME3,...	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Zm00001e016165_P001	BME3-ZF, BME3,...	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Zm00001e023650_P003	BME3-ZF, BME3,...	transcription factor (GATA)	0.05	OrthoFinder output from all 47 species
Zm00001e026256_P001	GATA23, Zm00001e026256	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004096	catalase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	316	349

External Links

No external refs found!

Pnu_g17490 (GATA12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation