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  5. Pnu_g17541

Pnu_g17541 (CCL)


Aliases : CCL

Description : regulatory protein *(LIR1) of ferredoxin-NADP oxidoreductase activity & original description: none


Gene families : OG0007865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17541
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Adi_g007568 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.06 OrthoFinder output from all 47 species
Ala_g09691 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.04 OrthoFinder output from all 47 species
Aob_g28012 No alias regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Aop_g08662 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32621.t1 CCL, Aspi01Gene32621 regulatory protein *(LIR1) of ferredoxin-NADP... 0.04 OrthoFinder output from all 47 species
Ceric.21G010900.1 Ceric.21G010900 not classified & original description: pacid=50603807... 0.04 OrthoFinder output from all 47 species
Dac_g15374 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.05 OrthoFinder output from all 47 species
Dcu_g02218 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Ehy_g07253 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.05 OrthoFinder output from all 47 species
Len_g20458 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.05 OrthoFinder output from all 47 species
Len_g36643 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.02 OrthoFinder output from all 47 species
Lfl_g06887 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.04 OrthoFinder output from all 47 species
MA_229452g0010 CCL LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.02 OrthoFinder output from all 47 species
Msp_g19440 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.04 OrthoFinder output from all 47 species
Msp_g29015 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.04 OrthoFinder output from all 47 species
Nbi_g24400 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Ore_g04797 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.05 OrthoFinder output from all 47 species
Ore_g32365 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Pir_g00779 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.06 OrthoFinder output from all 47 species
Smo444139 No alias Photosynthesis.photophosphorylation.linear electron... 0.05 OrthoFinder output from all 47 species
Spa_g03469 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.04 OrthoFinder output from all 47 species
Tin_g00199 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009856 Lir1 46 142
No external refs found!