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  5. Pnu_g17617

Pnu_g17617 (AtXTH12, XTH12)


Aliases : AtXTH12, XTH12

Description : not classified & original description: none


Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17617
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00209160 XTH6,... Enzyme classification.EC_2 transferases.EC_2.4... 0.05 OrthoFinder output from all 47 species
AT4G30270 MERI5B, XTH24,... xyloglucan endotransglucosylase/hydrolase 24 0.03 OrthoFinder output from all 47 species
AT5G65730 XTH6 xyloglucan endotransglucosylase/hydrolase 6 0.04 OrthoFinder output from all 47 species
Aev_g28296 XTH16 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01133 XTH8 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18684 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene21443.t1 XTR3, XTH25,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31929.t1 XTH8, Aspi01Gene31929 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53784.t1 XTH7, Aspi01Gene53784 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0121.g046866 XTH13, AtXTH13 EC_2.4 glycosyltransferase & original description: CDS=274-1143 0.04 OrthoFinder output from all 47 species
Ceric.02G006300.1 XTH5, EXGT-A4,... EC_2.4 glycosyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.19G055800.1 XTH8, Ceric.19G055800 EC_2.4 glycosyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.22G053000.1 XTR7, XTH15,... EC_2.4 glycosyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g09803 XTH13, AtXTH13 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48122 XTH9 xyloglucan/beta-glucan hydrolase *(EG16) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04416 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031578001 XTH16 Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max 0.04 OrthoFinder output from all 47 species
Len_g30451 XTH5, EXGT-A4 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34778 XTH8 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432086g0010 XTR6, XTH23 Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine... 0.03 OrthoFinder output from all 47 species
MA_465930g0010 XTH5, EXGT-A4 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Ore_g14834 MERI5B, XTH24,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22852 AtXTH12, XTH12 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28723 XTH9 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35434 XTH7 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c16_19530V3.1 XTH9, Pp3c16_19530 xyloglucan endotransglucosylase/hydrolase 9 0.02 OrthoFinder output from all 47 species
Ppi_g01794 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012055 XTH16 EC_2.4 glycosyltransferase & original description: CDS=448-1341 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017819 XTH16 EC_2.4 glycosyltransferase & original description: CDS=364-1278 0.02 OrthoFinder output from all 47 species
Solyc05g046290.3.1 XTR6, XTH23,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Solyc07g006860.3.1 TCH4, XTH22,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Spa_g01913 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04099 XTH5, EXGT-A4 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007032_P001 XTR3, XTH25,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Zm00001e013133_P001 XTR6, XTH23,... Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
Zm00001e024202_P001 XTH5, EXGT-A4,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Zm00001e039840_P001 TCH4, XTH22,... Xyloglucan endotransglycosylase/hydrolase protein 8... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR000757 GH16 55 139
No external refs found!