1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g18177

Pnu_g18177 (ATSS3, SS3)


Aliases : ATSS3, SS3

Description : starch synthase *(SS3) & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18177

Target Alias Description ECC score Gene Family Method Actions
Spa_g26732 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR005085 CBM25 698 785
IPR005085 CBM25 363 441
IPR005085 CBM25 536 622
IPR013534 Starch_synth_cat_dom 796 984
No external refs found!