Pnu_g18361 (CLA, DXS, CLA1, DEF, DXPS2)


Aliases : CLA, DXS, CLA1, DEF, DXPS2

Description : 1-deoxy-D-xylulose 5-phosphate synthase *(DXS) & original description: none


Gene families : OG0012364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18361
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Lfl_g27682 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase *(DXS) &... 0.07 OrthoFinder output from all 47 species
Sam_g49509 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 1 41
IPR033248 Transketolase_C 59 158
No external refs found!