Pnu_g18571 (AtERF48, DREB2C)

Aliases : AtERF48, DREB2C

Description : subgroup ERF-IV/DREB2 transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g18571
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AMTR_s00111p00051610	TINY2,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Adi_g056328	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g39323	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g36093	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Aspi01Gene25575.t1	DEAR1, CEJ1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56619.t1	RAP2.1, Aspi01Gene56619	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.06G023400.1	Ceric.06G023400	subgroup ERF-I transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.10G055400.1	Ceric.10G055400	not classified & original description: pacid=50611842...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000984.2	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dcu_g22960	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01025461001	RAP2.11	External stimuli response.biotic...	0.04	OrthoFinder output from all 47 species
LOC_Os06g09790.1	ORA47, LOC_Os06g09790	Ethylene-responsive transcription factor ERF018...	0.03	OrthoFinder output from all 47 species
LOC_Os10g25170.1	RAP2.2, LOC_Os10g25170	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Lfl_g06071	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
MA_26547g0010	CRF3	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_904750g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Mp4g00380.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp4g22290.1	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Nbi_g09486	tny	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g03908	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g28144	DDF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g28083	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g56408	DREB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0184.g024985	CRF3	subgroup ERF-VI transcription factor & original...	0.04	OrthoFinder output from all 47 species
Sam_g18921	No alias	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Smo428344	No alias	No description available	0.03	OrthoFinder output from all 47 species
Solyc01g014720.3.1	CRF4, Solyc01g014720	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc03g007460.3.1	CRF4, Solyc03g007460	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc03g093560.1.1	Solyc03g093560	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc08g007840.3.1	Solyc08g007840	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Tin_g00486	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e014413_P001	Zm00001e014413	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e026911_P005	DREB2A, DREB2,...	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	88	136

External Links

No external refs found!

Pnu_g18571 (AtERF48, DREB2C)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation