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  5. Pnu_g19113

Pnu_g19113 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00120860 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.03 OrthoFinder output from all 47 species
Dac_g25337 PDR6, ATPDR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031378001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_05443 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Lfl_g24204 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427561g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_17319g0020 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp1g25350.1 ATPDR7, PDR7 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Ore_g33567 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64480 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo133564 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo424639 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo441717 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc05g053610.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc08g067620.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc12g098210.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g21976 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027850_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Zm00001e039353_P001 PIS1, ABCG37,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 240 392
IPR043926 ABCG_dom 421 482
IPR013581 PDR_assoc 73 139
IPR013525 ABC_2_trans 538 751
IPR013525 ABC_2_trans 1 68
No external refs found!