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  5. Pnu_g20245

Pnu_g20245 (TCP3)


Aliases : TCP3

Description : TCP-type transcription factor & original description: none


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20245
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00135380 TCP10,... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00072430 TCP13, TFPD,... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AT3G02150 TCP13, TFPD, PTF1 plastid transcription factor 1 0.02 OrthoFinder output from all 47 species
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.03 OrthoFinder output from all 47 species
Ala_g18903 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28173 TCP2 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g40074 TCP10 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62817.t1 TCP2, Aspi01Gene62817 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37950 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11506 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020666001 TCP4, MEE35 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
Gb_35810 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Gb_38376 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Len_g11401 TCP5 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_101752g0020 ATTCP24, TCP24 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_52440g0010 TCP4, MEE35 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_547683g0010 TCP2 transcription factor (TCP) 0.07 OrthoFinder output from all 47 species
Mp1g19590.1 TCP3 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Msp_g48155 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05160 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23969 TCP4, MEE35 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02212 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g115010.3.1 TCP5, Solyc03g115010 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc05g009900.3.1 TCP12, BRC2,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e005909_P001 TCP2, Zm00001e005909 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e019734_P001 TCP5, Zm00001e019734 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 131 299
No external refs found!