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  5. Pnu_g20355

Pnu_g20355 (PGP21)


Aliases : PGP21

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20355
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00193700 ABCB14,... ABC transporter B family member 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00018p00193820 PGP1, ABCB1,... ABC transporter B family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00108620 PGP11,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AMTR_s00045p00109790 PGP11,... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00045p00109940 PGP11,... Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
AMTR_s00049p00128390 PGP16,... ABC transporter B family member 16 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00049p00128460 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT2G47000 ATPGP4, PGP4, ABCB4, MDR4 ATP binding cassette subfamily B4 0.03 OrthoFinder output from all 47 species
AT3G28380 PGP17 P-glycoprotein 17 0.03 OrthoFinder output from all 47 species
AT3G28415 No alias ABC transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G62150 PGP21 P-glycoprotein 21 0.03 OrthoFinder output from all 47 species
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.02 OrthoFinder output from all 47 species
Adi_g029160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056640 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g056650 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058585 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105656 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39147 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25151 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26174 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27372 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29011 PGP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18811 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39233 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68609 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08453.t1 PGP11, Aspi01Gene08453 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45620.t1 PGP11, Aspi01Gene45620 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46501.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17313 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75977 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G031400.1 PGP13, Ceric.10G031400 subfamily ABCB transporter & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.34G053700.1 PGP2, Ceric.34G053700 subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g06939 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35376 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39907 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03201 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20621 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47815 PGP11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30302 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46023 PGP13 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017696001 PGP11 Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
GSVIVT01021365001 PGP9 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01032578001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01036801001 No alias ABC transporter B family member 15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_01718 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_02468 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_10211 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_10216 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_33057 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_33058 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_36497 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g50070.1 LOC_Os01g50070 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g50080.1 ATPGP4, PGP4,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
LOC_Os01g50160.1 PGP11, LOC_Os01g50160 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Lfl_g40249 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_102299g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_10436810g0020 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_107576g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_111099g0010 No alias subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
MA_636449g0010 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_9148200g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_934204g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_937278g0010 PGP17 ABC transporter B family member 17 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g11830.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp7g04390.1 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Msp_g17749 ABCB19,... subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g26680 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32270 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18266 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29613 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32847 PGP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29224 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30543 PGP18 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33236 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35743 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42482 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09820 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42643 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56055 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_7260V3.1 ABCB19,... ATP binding cassette subfamily B19 0.03 OrthoFinder output from all 47 species
Ppi_g17867 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291 PGP2 subfamily ABCB transporter & original description: CDS=1-4248 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197 No alias subfamily ABCB transporter & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020710 ABCB19,... not classified & original description: CDS=1-1380 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107 PGP2 subfamily ABCB transporter & original description: CDS=729-4781 0.03 OrthoFinder output from all 47 species
Smo123915 PGP11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo169182 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo419448 ABCB19,... ABC transporter B family member 19 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo92485 ABCB19,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc03g005860.4.1 PGP11, Solyc03g005860 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Solyc06g009290.4.1 PGP21, Solyc06g009290 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc08g076720.4.1 PGP2, Solyc08g076720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc11g067300.2.1 PGP11, Solyc11g067300 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Spa_g19381 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40340 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06699 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023274_P001 PGP2, Zm00001e023274 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e041087_P002 Zm00001e041087 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 75 349
No external refs found!