Aliases : ATCSP2, GRP2, CSDP2, CSP2
Description : cold-responsive mRNA chaperone *(CSD) & original description: none
Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g09578 | No alias | RNA chaperone (CSP) of mRNA quality control & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G069400.1 | CSDP1, Ceric.11G069400 | cold-responsive mRNA chaperone *(CSD) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g30246 | ATCSP2, GRP2, CSDP2, CSP2 | cold-responsive mRNA chaperone *(CSD) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0173.g024476 | ATCSP3, CSP3 | cold-responsive mRNA chaperone *(CSD) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g07960 | No alias | cold-responsive mRNA chaperone *(CSD) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Smo154869 | CSDP1 | External stimuli response.temperature.Csd... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g055250.1.1 | ATCSP2, GRP2,... | RNA chaperone (CSP). mRNA chaperone (CSD) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0004097 | catechol oxidase activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002059 | CSP_DNA-bd | 25 | 89 |
| No external refs found! |
