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  5. Pnu_g21396

Pnu_g21396 (KCS4)


Aliases : KCS4

Description : 3-ketoacyl-CoA synthase *(KCS) & original description: none


Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g21396
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00102500 KCS5, CER60,... 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G71160 KCS7 3-ketoacyl-CoA synthase 7 0.02 OrthoFinder output from all 47 species
AT3G52160 KCS15 3-ketoacyl-CoA synthase 15 0.02 OrthoFinder output from all 47 species
Aop_g00689 HIC, KCS13 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20970 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37603 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68102 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17651.t1 KCS10, FDH,... 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52641.t1 HIC, KCS13,... 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62724.t1 KCS4, Aspi01Gene62724 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0711.g083016 KCS5, CER60 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-708 0.04 OrthoFinder output from all 47 species
Ceric.01G120500.1 KCS9, Ceric.01G120500 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.12G035400.1 KCS9, Ceric.12G035400 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G023900.1 KCS4, Ceric.36G023900 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g47176 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022919001 KCS7 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
GSVIVT01026270001 KCS21 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
GSVIVT01034244001 KCS15 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
Gb_23820 KCS11 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species
LOC_Os02g11070.1 KCS11, LOC_Os02g11070 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Len_g03829 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16390 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05134 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02946 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07968 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16289 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44995 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04386 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12809 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c4_2960V3.1 KCS4, Pp3c4_2960 3-ketoacyl-CoA synthase 4 0.01 OrthoFinder output from all 47 species
Ppi_g31874 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32080 KCS9 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g49794 KCS10, FDH not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003565 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0098.g019471 KCS5, CER60 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1377 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0248.g026727 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1953 0.03 OrthoFinder output from all 47 species
Spa_g06425 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22293 KCS17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03295 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 418 498
IPR013601 FAE1_typ3_polyketide_synth 112 399
No external refs found!