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  5. Pnu_g21765

Pnu_g21765


Description : AHL clade-A transcription factor & original description: none


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g21765

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00025000 AHL22,... AT-hook motif nuclear-localized protein 24... 0.03 OrthoFinder output from all 47 species
AT4G22810 No alias Predicted AT-hook DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g074649 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12444 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30094.t1 Aspi01Gene30094 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04496 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09896 GIK AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g53634 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G016200.1 AHL22, Ceric.30G016200 AHL clade-A transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g32736 GIK AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42758 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06406 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03451 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05590 AHL20 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22290 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27436 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29218 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31564 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013202001 No alias AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
Gb_34320 AHL22 AT-hook motif nuclear-localized protein 24... 0.03 OrthoFinder output from all 47 species
LOC_Os02g25020.1 LOC_Os02g25020 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
LOC_Os07g13100.1 AHL20, LOC_Os07g13100 AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
LOC_Os08g06320.1 LOC_Os08g06320 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
MA_12232g0010 No alias AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
Mp7g18120.1 AHL20 AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
Msp_g12905 GIK AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07778 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25202 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49267 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g080960.4.1 GIK, Solyc01g080960 AT-hook motif nuclear-localized protein 21... 0.02 OrthoFinder output from all 47 species
Solyc06g060500.1.1 Solyc06g060500 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Solyc09g089620.1.1 AHL20, Solyc09g089620 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
Solyc11g006090.3.1 AHL20, Solyc11g006090 AT-hook motif nuclear-localized protein 19... 0.03 OrthoFinder output from all 47 species
Spa_g38567 AHL20 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036564_P001 AHL22, Zm00001e036564 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Zm00001e041402_P001 Zm00001e041402 AT-hook motif nuclear-localized protein 21... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 91 203
No external refs found!