Pnu_g22840 (OBP4)

Aliases : OBP4

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g22840

Target	Alias	Description	ECC score	Gene Family Method
Ala_g03761	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g16037	ADOF2, DOF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10436933g0030	CDF3	component BAF255/170 of chromatin remodeling complex....	0.02	OrthoFinder output from all 47 species
Mp1g18540.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Pnu_g13771	TMO6	transcription factor *(DOF) & original description: none	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517	CDF3	transcription factor *(DOF) & original description: CDS=154-1659	0.02	OrthoFinder output from all 47 species
Solyc06g062520.1.1	ADOF1, DOF1,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e011750_P002	Zm00001e011750	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e012437_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e012824_P001	CDF1, Zm00001e012824	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e015597_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e018163_P001	Zm00001e018163	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e019172_P001	Zm00001e019172	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e029641_P001	OBP3, Zm00001e029641	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Zm00001e034454_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	34	91

External Links

No external refs found!

Pnu_g22840 (OBP4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation