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  5. Pnu_g22862

Pnu_g22862 (CPS, ATCPS1, ABC33, CPS1, GA1)


Aliases : CPS, ATCPS1, ABC33, CPS1, GA1

Description : EC_5.5 intramolecular lyase & original description: none


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g22862

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0092.g043147 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: CDS=543-2831 0.04 OrthoFinder output from all 47 species
Len_g05623 CPS, ATCPS1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22132 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g005720.4.1 KS, KS1, ATKS1,... ent-kaurene synthase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 297 504
IPR005630 Terpene_synthase_metal-bd 547 808
No external refs found!