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  5. Pnu_g23493

Pnu_g23493 (GRP2, ATGRP2, GR-RBP2)


Aliases : GRP2, ATGRP2, GR-RBP2

Description : RNA editing factor *(ORRM3) & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g23493

Target Alias Description ECC score Gene Family Method Actions
AT5G06210 No alias RNA binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
Adi_g034694 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0136.g050935 GRP2, ATGRP2, GR-RBP2 not classified & original description: CDS=1-543 0.03 OrthoFinder output from all 47 species
Cba_g27479 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G037800.1 GR-RBP4, GRP4,... not classified & original description: pacid=50619932... 0.03 OrthoFinder output from all 47 species
Dac_g03970 GR-RBP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48605 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g17060.1 LOC_Os03g17060 Organelle RRM domain-containing protein 2, mitochondrial... 0.02 OrthoFinder output from all 47 species
LOC_Os08g04440.1 LOC_Os08g04440 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
Lfl_g32878 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23738 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05645 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26805 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05591 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17920 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30959 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31703 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16011 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30378 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011440_P001 Zm00001e011440 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Zm00001e028502_P003 Zm00001e028502 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 113 182
No external refs found!