Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00230160 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00058p00187000 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G74400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036768 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080167 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086048 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17019 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g23769 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g23363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g32957 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g23683 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene16353.t1 | Aspi01Gene16353 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene35394.t1 | Aspi01Gene35394 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023505 | No alias | not classified & original description: CDS=32-2620 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g15519 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g26306 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G019000.1 | Ceric.02G019000 | not classified & original description: pacid=50585115... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G028200.1 | OTP84, Ceric.02G028200 | not classified & original description: pacid=50583866... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G009800.1 | Ceric.11G009800 | not classified & original description: pacid=50594985... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G008800.1 | Ceric.15G008800 | not classified & original description: pacid=50639552... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G001700.1 | Ceric.28G001700 | not classified & original description: pacid=50570577... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.39G022100.1 | Ceric.39G022100 | not classified & original description: pacid=50582510... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000851.30 | No alias | Pentatricopeptide repeat-containing protein At5g61990,... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001130.28 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g18582 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30474 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g10023 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19361 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g20638 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g24017 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014727001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01015468001 | No alias | Pentatricopeptide repeat-containing protein At1g31430... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017378001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021403001 | No alias | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035618001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036943001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037332001 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10113 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_12573 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_20571 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g58980.1 | LOC_Os04g58980 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g08650.1 | LOC_Os06g08650 | Pentatricopeptide repeat-containing protein At2g03380,... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g10511 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17726 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30844 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g37815 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05679 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28762 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g33982 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g35725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41382 | SLO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g44897 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15698 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g17818 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20126 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g01896 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12671 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32824 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35403 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02540 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12824 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g13601 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g37149 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g58725 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63296 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g03883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53952 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08793 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26279 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g28071 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g32996 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g51341 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g55549 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05979 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08462 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g17464 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g23441 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g30039 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013166_P001 | Zm00001e013166 | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020442_P001 | Zm00001e020442 | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041048_P001 | OTP86, Zm00001e041048 | RNA editing factor (OTP86) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 410 | 456 |
| IPR002885 | Pentatricopeptide_repeat | 106 | 153 |
| IPR002885 | Pentatricopeptide_repeat | 207 | 254 |
| IPR002885 | Pentatricopeptide_repeat | 309 | 357 |
| IPR002885 | Pentatricopeptide_repeat | 511 | 558 |
| IPR002885 | Pentatricopeptide_repeat | 283 | 307 |
| IPR002885 | Pentatricopeptide_repeat | 485 | 510 |
| IPR002885 | Pentatricopeptide_repeat | 14 | 38 |
| No external refs found! |
