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  5. Pnu_g23878

Pnu_g23878


Description : not classified & original description: none


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g23878

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00014550 evm_27.TU.AmTr_v1... Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00153p00027650 evm_27.TU.AmTr_v1... Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G13810 No alias Glutaredoxin family protein 0.02 OrthoFinder output from all 47 species
Adi_g002031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g115156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05749.t1 Aspi01Gene05749 actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31955.t1 Aspi01Gene31955 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05842 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Cba_g33333 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Ceric.04G013200.1 Ceric.04G013200 not classified & original description: pacid=50630697... 0.04 OrthoFinder output from all 47 species
Ceric.05G084000.1 Ceric.05G084000 not classified & original description: pacid=50577200... 0.02 OrthoFinder output from all 47 species
Ceric.07G055600.1 Ceric.07G055600 not classified & original description: pacid=50627902... 0.01 OrthoFinder output from all 47 species
Dcu_g14274 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g02804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16896 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g30743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g51370.1 LOC_Os02g51370 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g39450.1 LOC_Os05g39450 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46570.1 LOC_Os07g46570 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os08g07450.1 LOC_Os08g07450 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g18290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g09369 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g33613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_111367g0010 No alias Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g10856 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g21184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27310 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Pp3c5_15250V3.1 Pp3c5_15250 Glutaredoxin family protein 0.01 OrthoFinder output from all 47 species
Ppi_g02221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020827 No alias not classified & original description: CDS=1-1818 0.03 OrthoFinder output from all 47 species
Sam_g36018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo116000 No alias Cytoskeleton.cp-actin-dependent plastid movement.THRUMIN... 0.02 OrthoFinder output from all 47 species
Smo15619 No alias Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g078380.1.1 Solyc03g078380 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e008195_P001 Zm00001e008195 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e015849_P001 Zm00001e015849 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e023894_P001 Zm00001e023894 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e027282_P001 Zm00001e027282 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e028821_P001 Zm00001e028821 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e036119_P001 Zm00001e036119 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 405 470
No external refs found!